InterPro : IPR020056

Name  Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Short Name  Rbsml_L25/Gln-tRNA_synth_b-brl
Type  Domain Description  The bacterial ribosomal protein L25 is bound to 5S rRNA along with L5 and L18, forming a separate domain of the ribosome []. The solution structure of protein L25 uncomplexed with RNA shows two significantly disordered loops and a closed beta-barrel domain with a complex topology that has significant structural similarities to the N-terminal domain of the Thermus thermophilusribosomal protein TL5, to the general stress protein CTC, and to the C-terminal anticodon-binding domain of Escherichia coliglutaminyl-tRNA synthetase (GlnRS) [, ]. GlnRS contains a duplication consisting of two L25-like beta-barrels domains with the swapping of N-terminal strands.This entry represents the N-terminal subdomain, which has a beta-barrel structure.

Sequence Features

GO Displayer


InterPro protein domain ID --> Contigs



0 Child Features

0 Contains

7 Found In

Id Name Short Name Type
IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain Glu/Gln-tRNA-synth_Ib_codon-bd Domain
IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain Ribosomal_L25/Gln-tRNA_synth Domain
IPR000924 Glutamyl/glutaminyl-tRNA synthetase Glu/Gln-tRNA-synth Family
IPR004514 Glutamine-tRNA synthetase Gln-tRNA-synth Family
IPR004526 Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic Glu-tRNA-synth_arc/euk Family
IPR020055 Ribosomal protein L25, short-form Ribosomal_L25_short Family
IPR001021 Ribosomal protein L25, long-form Ribosomal_L25_long Family

0 Parent Features

3 Publications

First Author Title Year Journal Volume Pages
Fedorov R Structure of ribosomal protein TL5 complexed with RNA provides new insights into the CTC family of stress proteins. 2001 Acta Crystallogr D Biol Crystallogr 57 968-76
Sherlin LD tRNA-dependent active site assembly in a class I aminoacyl-tRNA synthetase. 2003 Structure 11 591-603
Lu M Structure of Escherichia coli ribosomal protein L25 complexed with a 5S rRNA fragment at 1.8-A resolution. 2000 Proc Natl Acad Sci U S A 97 2023-8

To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)