Sequence Features
GO Displayer
3 Blast Sequence Features
| Blast | Target Species | Blast Description | evalue | Contig Location | Length | Strand |
|---|---|---|---|---|---|---|
| NP_523414.1 | Drosophila melanogaster | CG12530 gene product from transcript CG12530-RC | 6.0E-109 | 107-682 | 576 | 1 |
| NP_426359.1 | Homo sapiens | cell division cycle 42 | 4.0E-108 | 107-682 | 576 | 1 |
| XP_003696353.1 | Apis florea | cdc42 homolog | 2.0E-111 | 101-682 | 582 | 1 |
15 Domain Sequence Features
| Domain | Type | InterPro | Domain Description | Score | Contig Location | Length | Strand |
|---|---|---|---|---|---|---|---|
| TIGR00231 | TIGRFAMs | IPR005225 | small_GTP: small GTP-binding protein domain | 1.6E-40 | 110-574 | 465 | 1 |
| SM00175 | SMART | IPR003579 | Rab subfamily of small GTPases | 2.2E-13 | 116-640 | 525 | 1 |
| PS51420 | PROFILE | IPR003578 | small GTPase Rho family profile. | 26.881 | 95-631 | 537 | 1 |
| PTHR24072 | PANTHER | RHO FAMILY GTPASE | 4.1E-136 | 98-679 | 582 | 1 | |
| SM00173 | SMART | IPR020849 | Ras subfamily of RAS small GTPases | 1.1E-15 | 107-640 | 534 | 1 |
| PF00071 | PFAM | IPR001806 | Ras family | 5.1E-53 | 119-628 | 510 | 1 |
| G3DSA:3.40.50.300 | GENE3D | IPR027417 | P-loop containing nucleotide triphosphate hydrolases | 2.4E-63 | 110-646 | 537 | 1 |
| SSF52540 | SSF | IPR027417 | P-loop containing nucleoside triphosphate hydrolases | 1.2E-55 | 113-622 | 510 | 1 |
| SM00174 | SMART | IPR003578 | Rho (Ras homology) subfamily of Ras-like small GTPases | 5.6E-123 | 122-640 | 519 | 1 |
| PR00449 | PRINTS | IPR001806 | Transforming protein P21 ras signature | 3.1E-29 | 236-301 | 66 | 1 |
| PR00449 | PRINTS | IPR001806 | Transforming protein P21 ras signature | 3.1E-29 | 422-460 | 39 | 1 |
| PR00449 | PRINTS | IPR001806 | Transforming protein P21 ras signature | 3.1E-29 | 116-178 | 63 | 1 |
| PR00449 | PRINTS | IPR001806 | Transforming protein P21 ras signature | 3.1E-29 | 566-631 | 66 | 1 |
| PR00449 | PRINTS | IPR001806 | Transforming protein P21 ras signature | 3.1E-29 | 185-232 | 48 | 1 |
| PTHR24072:SF129 | PANTHER | CDC42L PROTEIN | 4.1E-136 | 98-679 | 582 | 1 |
Genomics
Predicted Gene Displayer
J Browse Displayer
Homologue Displayer
21 Treefam Sequence Features
| Gene Family | Score | Reading Frame | Bit Score | Coverage | Contig Location | Length | Strand |
|---|---|---|---|---|---|---|---|
| TF317762 | 2.8E-8 | 2 | 31.4 | 0.5122429 | 108-630 | 523 | 1 |
| TF331746 | 8.3E-72 | 2 | 241.1 | 0.5445641 | 111-666 | 556 | 1 |
| TF313448 | 2.0E-17 | 2 | 62.0 | 0.4975514 | 111-618 | 508 | 1 |
| TF300803 | 2.9E-11 | 2 | 42.2 | 0.5122429 | 111-633 | 523 | 1 |
| TF331219 | 1.1E-56 | 2 | 192.0 | 0.5004897 | 114-624 | 511 | 1 |
| TF323347 | 3.4E-48 | 2 | 163.3 | 0.5122429 | 114-636 | 523 | 1 |
| TF326626 | 4.9E-10 | 2 | 37.4 | 0.49167484 | 114-615 | 502 | 1 |
| TF321839 | 3.7E-101 | 2 | 338.5 | 0.52987266 | 117-657 | 541 | 1 |
| TF350739 | 3.8E-50 | 2 | 170.1 | 0.5151812 | 117-642 | 526 | 1 |
| TF328564 | 8.8E-16 | 2 | 56.5 | 0.5004897 | 117-627 | 511 | 1 |
| TF313106 | 5.7E-9 | 2 | 33.7 | 0.45641527 | 117-582 | 466 | 1 |
| TF330887 | 2.2E-56 | 2 | 190.8 | 0.52399606 | 120-654 | 535 | 1 |
| TF313199 | 9.5E-15 | 2 | 54.2 | 0.48873654 | 120-618 | 499 | 1 |
| TF314986 | 1.4E-18 | 2 | 66.1 | 0.4946131 | 123-627 | 505 | 1 |
| TF312895 | 6.1E-17 | 2 | 61.8 | 0.47404507 | 123-606 | 484 | 1 |
| TF315926 | 8.3E-11 | 2 | 40.5 | 0.4505387 | 123-582 | 460 | 1 |
| TF300837 | 9.8E-104 | 2 | 347.1 | 0.54162586 | 126-678 | 553 | 1 |
| TF316238 | 1.3E-5 | 2 | 23.1 | 0.47992164 | 126-615 | 490 | 1 |
| TF323428 | 4.5E-16 | 2 | 57.8 | 0.453477 | 129-591 | 463 | 1 |
| TF331262 | 1.6E-9 | 2 | 37.4 | 0.46816847 | 144-621 | 478 | 1 |
| TF105954 | 5.6E-21 | 2 | 74.6 | 0.46229187 | 147-618 | 472 | 1 |
