Sequence Features
GO Displayer
3 Blast Sequence Features
| Blast | Target Species | Blast Description | evalue | Contig Location | Length | Strand |
|---|---|---|---|---|---|---|
| NP_061828.1 | Homo sapiens | ubiquitin B | 3.0E-49 | 1-249 | 249 | 1 |
| XP_004934049.1 | Bombyx mori | polyubiquitin-like | 1.0E-51 | 1-249 | 249 | 1 |
| XP_006220138.1 | Vicugna pacos | polyubiquitin-A-like | 1.0E-51 | 1-249 | 249 | 1 |
13 Domain Sequence Features
| Domain | Type | InterPro | Domain Description | Score | Contig Location | Length | Strand |
|---|---|---|---|---|---|---|---|
| PTHR10666 | PANTHER | UBIQUITIN | 2.3E-71 | 1-246 | 246 | 1 | |
| PS50053 | PROFILE | IPR000626 | Ubiquitin domain profile. | 13.38 | 133-249 | 117 | 1 |
| PS50053 | PROFILE | IPR000626 | Ubiquitin domain profile. | 20.501 | 1-129 | 129 | 1 |
| G3DSA:3.10.20.90 | GENE3D | Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 1.2E-27 | 1-132 | 132 | 1 | |
| PR00348 | PRINTS | IPR019956 | Ubiquitin signature | 1.8E-13 | 163-222 | 60 | 1 |
| PR00348 | PRINTS | IPR019956 | Ubiquitin signature | 1.8E-13 | 226-249 | 24 | 1 |
| PF00240 | PFAM | IPR000626 | Ubiquitin family | 2.0E-12 | 148-246 | 99 | 1 |
| PF00240 | PFAM | IPR000626 | Ubiquitin family | 4.3E-20 | 1-123 | 123 | 1 |
| SSF54236 | SSF | IPR029071 | Ubiquitin-like | 4.63E-19 | 1-129 | 129 | 1 |
| SM00213 | SMART | IPR000626 | Ubiquitin homologues | 0.55 | 1-117 | 117 | 1 |
| SM00213 | SMART | IPR000626 | Ubiquitin homologues | 1.2 | 133-246 | 114 | 1 |
| SSF54236 | SSF | IPR029071 | Ubiquitin-like | 1.1E-13 | 130-246 | 117 | 1 |
| G3DSA:3.10.20.90 | GENE3D | Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 1.7E-26 | 136-246 | 111 | 1 |
Genomics
Predicted Gene Displayer
J Browse Displayer
Homologue Displayer
26 Treefam Sequence Features
| Gene Family | Score | Reading Frame | Bit Score | Coverage | Contig Location | Length | Strand |
|---|---|---|---|---|---|---|---|
| TF354256 | 7.5E-65 | 1 | 218.1 | 0.98406374 | 3-249 | 247 | 1 |
| TF300820 | 3.6E-61 | 1 | 206.4 | 0.98406374 | 3-249 | 247 | 1 |
| TF352129 | 1.5E-28 | 1 | 99.6 | 0.5179283 | 3-132 | 130 | 1 |
| TF300072 | 4.8E-26 | 1 | 90.3 | 0.52988046 | 3-135 | 133 | 1 |
| TF300036 | 3.1E-23 | 1 | 82.3 | 0.52988046 | 3-135 | 133 | 1 |
| TF338379 | 1.3E-21 | 1 | 75.7 | 0.5179283 | 3-132 | 130 | 1 |
| TF354229 | 5.2E-10 | 1 | 37.2 | 0.42231077 | 3-108 | 106 | 1 |
| TF300201 | 4.3E-14 | 1 | 50.8 | 0.48207173 | 6-126 | 121 | 1 |
| TF354228 | 3.5E-11 | 1 | 42.0 | 0.45816734 | 6-120 | 115 | 1 |
| TF313779 | 4.0E-10 | 1 | 39.0 | 0.5059761 | 6-132 | 127 | 1 |
| TF329607 | 2.6E-9 | 1 | 34.6 | 0.5059761 | 6-132 | 127 | 1 |
| TF327176 | 2.2E-7 | 1 | 28.9 | 0.43426296 | 6-114 | 109 | 1 |
| TF314529 | 1.2E-10 | 1 | 39.5 | 0.47011954 | 9-126 | 118 | 1 |
| TF328437 | 1.3E-8 | 1 | 32.1 | 0.44621515 | 9-120 | 112 | 1 |
| TF106434 | 4.3E-9 | 1 | 33.7 | 0.43426296 | 12-120 | 109 | 1 |
| TF314412 | 1.8E-7 | 1 | 28.7 | 0.42231077 | 15-120 | 106 | 1 |
| TF352129 | 8.4E-24 | 1 | 84.0 | 0.45816734 | 135-249 | 115 | 1 |
| TF338379 | 4.5E-10 | 1 | 37.6 | 0.44621515 | 135-246 | 112 | 1 |
| TF313779 | 1.1E-8 | 1 | 34.3 | 0.45816734 | 135-249 | 115 | 1 |
| TF300201 | 1.5E-8 | 1 | 32.5 | 0.45816734 | 135-249 | 115 | 1 |
| TF101216 | 2.4E-6 | 1 | 25.8 | 0.41035858 | 135-237 | 103 | 1 |
| TF354228 | 1.8E-5 | 1 | 23.2 | 0.43426296 | 135-243 | 109 | 1 |
| TF354229 | 2.2E-5 | 1 | 21.9 | 0.42231077 | 138-243 | 106 | 1 |
| TF323925 | 5.6E-5 | 1 | 21.0 | 0.43426296 | 138-246 | 109 | 1 |
| TF314529 | 2.8E-4 | 1 | 18.5 | 0.42231077 | 144-249 | 106 | 1 |
| TF353890 | 4.6E-40 | 4 | 136.6 | 0.9760956 | 2-248 | 247 | -1 |
