InterPro : IPR027248

Name  Small nuclear ribonucleoprotein Sm D2 Short Name  Sm_D2
Type  Family Description  This entry represents the small nuclear ribonucleoprotein Sm D2 (Smd2) []. Smd2 is a component of the SM core complex, a ring complex consists of six or seven subunits []. SM complex associates with the snRNPs and is involved in the RNA-processing pathways []. Small nuclear ribonucleoproteins (snRNPs) U1, U2, U4/U6 and U5 snRNPs play important roles in pre-mRNA splicing. The U1, U2, U4 and U5 small nuclear RNAs (snRNAs) present in these particles, each contains a conserved single-stranded sequence element, the Sm binding site. The Sm binding site interacts with the Sm proteins to form an Sm core structure [].
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Proteins

InterPro protein domain ID --> Contigs

 

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2 Publications

First Author Title Year Journal Volume Pages
Lehmeier T cDNA cloning of the Sm proteins D2 and D3 from human small nuclear ribonucleoproteins: evidence for a direct D1-D2 interaction. 1994 Proc Natl Acad Sci U S A 91 12317-21
Scofield DG Evolutionary diversification of the Sm family of RNA-associated proteins. 2008 Mol Biol Evol 25 2255-67



To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)