Transcript : SMEST021817001.1 S. mediterranea S2F2

Length  476   Source  In silico gene prediction (AUGUSTUS v3.3)
Score  0.08
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Organism Field Displayer

Association Displayer

Sequence Features

GO Displayer

3 Blast Sequence Features

Blast Target Species Blast Description evalue Contig Location Length Strand
XP_010718158.1 Meleagris gallopavo brain protein I3 8.71E-17 90-371 282 1
XP_013032540.1 Anser cygnoides domesticus brain protein I3 2.34E-15 114-371 258 1
XP_014806843.1 Calidris pugnax brain protein I3 3.07E-15 114-371 258 1

2 Domain Sequence Features

Domain Type InterPro Domain Description Score Contig Location Length Strand
PTHR13551 PANTHER IPR019317 BRAIN PROTEIN I3 1.5E-16 153-365 213 1
PF10164 PFAM IPR019317 Uncharacterized conserved protein (DUF2367) 1.4E-21 168-365 198 1

Genomics

Predicted Gene Displayer

J Browse Displayer

Homologue Displayer

1 ORFs

Contig Location Length Strand Sequence
39-428 390 1

0 Treefam Sequence Features

Expression Information

Planmine Rnai Result Displayer

Planmine Anatomy Displayer

Planmine Cell Type Displayer

Planmine Single Cell Displayer

Planmine Timeseries Result Displayer

Planmine Regeneration Time Course Displayer

Planmine Additional Displayer




To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)