InterPro : IPR014412

Name  Genome polyprotein, Flavivirus Short Name  Gen_Poly_FLV
Type  Family Description  This group represents a genome polyprotein from Flavivirus. The polyprotein is cleaved into 14 chains, including the RNA-directed RNA polymerase NS5 or non-structural protein 5, with three activities: mRNA (guanine-N(7)-)-methyltransferase (), mRNA (nucleoside-2'-O-)-methyltransferase () and RNA-directed RNA polymerase ().
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Sequence Features

GO Displayer

Proteins

InterPro protein domain ID --> Contigs

 

Other

0 Child Features

17 Contains

Id Name Short Name Type
IPR001650 Helicase, C-terminal Helicase_C Domain
IPR002877 Ribosomal RNA methyltransferase FtsJ domain rRNA_MeTrfase_FtsJ_dom Domain
IPR007094 RNA-directed RNA polymerase, catalytic domain RNA-dir_pol_PSvirus Domain
IPR000208 RNA-directed RNA polymerase, flavivirus RNA-dir_pol_flavivirus Domain
IPR011492 DEADbox, Flavivirus DEAD_Flavivir Domain
IPR001850 Flavivirus NS3, petidase S7 Flavivirus_NS3_S7 Domain
IPR002535 Flavivirus polyprotein propeptide Flavi_propep Domain
IPR000752 Flavivirus non-structural protein NS2A Flavi_NS2A Domain
IPR000336 Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain Flavivir/Alphavir_Ig-like Domain
IPR000487 Flavivirus non-structural protein NS2B Flavi_NS2B Domain
IPR000069 Envelope glycoprotein M, flavivirus Env_glycoprot_M_flavivir Domain
IPR013754 Glycoprotein E dimerisation domain GlyE_dim Domain
IPR000404 Flavivirus non-structural protein NS4A Flavi_NS4A Domain
IPR013756 Glycoprotein E central domain, subdomain 2 GlyE_cen_dom_subdom2 Domain
IPR001157 Flavivirus non-structural protein NS1 Flavi_NS1 Domain
IPR001528 Flavivirus non-structural protein NS4B Flavi_NS4B Domain
IPR001122 Flavivirus capsid protein C Flavi_capsidC Domain

0 Found In

0 Parent Features

0 Publications




To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)