InterPro : IPR016371

Name  RNA polymerase sigma-H factor Short Name  RNA_pol_sigma-H_factor
Type  Family Description  This entry represents RNA polymerase sigma-H factor found in bacteria. Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. The major sigma factor in most bacteria is sigma-A. Sigma-H, the sigH (spo0H) gene product, directs the transcription of several genes that function in the transition from exponential growth to stationary phase, including the initiation of spore formation and entry into the state of genetic competence [].
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Sequence Features

GO Displayer

Proteins

InterPro protein domain ID --> Contigs

 

Other

1 Child Features

Id Name Short Name Type
IPR014218 RNA polymerase sigma-H type RNA_pol_sigma-H Family

5 Contains

Id Name Short Name Type
IPR011991 Winged helix-turn-helix DNA-binding domain WHTH_DNA-bd_dom Domain
IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RNA_pol_sigma70_r4_t2 Domain
IPR013325 RNA polymerase sigma factor, region 2 RNA_pol_sigma_r2 Domain
IPR007627 RNA polymerase sigma-70 region 2 RNA_pol_sigma70_r2 Domain
IPR000943 RNA polymerase sigma-70 RNA_pol_sigma70 Domain

0 Found In

0 Parent Features

1 Publications

First Author Title Year Journal Volume Pages
Britton RA Genome-wide analysis of the stationary-phase sigma factor (sigma-H) regulon of Bacillus subtilis. 2002 J Bacteriol 184 4881-90



To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)