InterPro : IPR019975

Name  KH-domain/beta-lactamase-domain protein, archaea Short Name  KH-dom/beta-lactamase-dom_arc
Type  Family Description  This family of proteins is universal in the archaea and consists of an N-terminal type-1 KH-domain, a central beta-lactamase-domain, and a C-terminal motif associated with RNA metabolism. KH-domains are associated with RNA-binding, so this protein is a likely metal-dependent RNAase. This family was defined in []as arCOG01782.
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Sequence Features

GO Displayer

Proteins

InterPro protein domain ID --> Contigs

 

Other

0 Child Features

5 Contains

Id Name Short Name Type
IPR001279 Beta-lactamase-like Beta-lactamas-like Domain
IPR011108 RNA-metabolising metallo-beta-lactamase RMMBL Domain
IPR022712 Beta-Casp domain Beta_Casp Domain
IPR009019 K homology domain, prokaryotic type KH_prok-type Domain
IPR004087 K Homology domain KH_dom Domain

0 Found In

0 Parent Features

1 Publications

First Author Title Year Journal Volume Pages
Makarova KS Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea. 2007 Biol Direct 2 33



To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)