Publication : A complex of Cas proteins 5, 6, and 7 is required for the biogenesis and stability of clustered regularly interspaced short palindromic repeats (crispr)-derived rnas (crrnas) in Haloferax volcanii.

First Author  Brendel J Year  2014
Journal  J Biol Chem Volume  289
Pages  7164-77 PubMed ID  24459147
Issue  10

89 Bio Entities

Id Name Short Name Type
IPR013397 CRISPR-associated protein Csy1 CRISPR-assoc_prot_Csy1 Family
IPR013422 CRISPR-associated protein Cas5, N-terminal CRISPR-assoc_prot_Cas5_N Domain
IPR013383 CRISPR-associated protein DxTHG, conserved site CRISPR-assoc_prot_DxTHG_CS Conserved_site
IPR006483 CRISPR-associated Cas3-HD domain CRISPR-assoc_Cas3_HD Domain
IPR006482 CRISPR-associated protein TM1801 CRISPR-assoc_prot_TM1801 Family
IPR013418 CRISPR-associated protein Csd2 CRISPR-assoc_prot_Csd2 Family
IPR013419 CRISPR-associated protein Csh2 CRISPR-assoc_prot_Csh2 Family
IPR006474 Helicase Cas3, CRISPR-associated, core Helicase_Cas3_CRISPR-ass_core Domain
IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Virulence_VapD/CRISPR_Cas2 Family
IPR013414 CRISPR-associated protein Cas7, subtype I-B/Tneap Cas7/Cst2/DevR_sub_I-B/Tneap Family
IPR014174 CRISPR-associated protein, Cas6-related CRISPR-assoc_prot_Cas6-rel Family
IPR013442 CRISPR-associated protein APE2256 CRISPR-assoc_prot_APE2256 Domain
IPR017575 CRISPR-associated helicase, CYANO-type CRISPR-assoc_helicase_CYANO Family
IPR017548 CRISPR-associated DEAD/DEAH-box helicase Csf4 CRISPR-assoc_helicase_Csf4 Family
IPR014055 CRISPR-associated protein, Csx11 CRISPR-assoc_prot_Csx11 Family
IPR014082 CRISPR-associated protein, Cas02710 CRISPR-assoc_prot_Cas02710 Family
IPR002729 CRISPR-associated protein Cas1 CRISPR-assoc_Cas1 Family
IPR019855 CRISPR-associated protein Cas1, NMENI subtype CRISPR-assoc_Cas1_NMENI Family
IPR019857 CRISPR-associated protein Cas1, YPEST subtype CRISPR-assoc_Cas1_YPEST-subtyp Family
IPR019858 CRISPR-associated protein Cas1, HMARI/TNEAP subtype CRISPR-assoc_Cas1_HMARI/TNEAP Family
IPR023843 CRISPR-associated protein Cas1, cyanobacteria-type CRISPR-assoc_Cas1_cyanobact Family
IPR023844 CRISPR-associated protein Cas1, MYXAN subtype CRISPR-assoc_Cas1_MYXAN Family
IPR019851 CRISPR-associated protein Cas1, ECOLI subtype CRISPR-assoc_Cas1_ECOLI Family
IPR002764 CRISPR-associated protein Cas7/Cst2/DevR, subtype I-a/Apern Cas7/Cst2/DevR_sub_I-a/Apern Family
IPR010154 CRISPR-associated protein Cas7 CRISPR-assoc_neg_autoregulator Family
IPR013407 CRISPR-associated protein Crm2 CRISPR-assoc_prot_Crm2 Family
IPR013408 CRISPR-associated protein Csm1 CRISPR-assoc_prot_Csm1 Family
IPR010160 CRISPR-associated protein, Cmr5 CRISPR-assoc_prot_Cmr5 Family
IPR010165 CRISPR-associated protein, TM1793 CRISPR-assoc_prot_TM1793 Family
IPR019117 CRISPR-associated protein, Cmr3 CRISPR-assoc_protein_Cmr3 Family

To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)