Publication : Sigma factors from E. coli, B. subtilis, phage SP01, and phage T4 are homologous proteins.

First Author  Gribskov M Year  1986
Journal  Nucleic Acids Res Volume  14
Pages  6745-63 PubMed ID  3092189
Issue  16

2 Authors

40 Bio Entities

Id Name Short Name Type
IPR013324 RNA polymerase sigma factor, region 3/4 RNA_pol_sigma_r3_r4 Domain
IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RNA_pol_sigma70_r4_t2 Domain
IPR007631 RNA polymerase sigma factor 70, non-essential domain RNA_pol_sigma_70_non-ess Domain
IPR014284 RNA polymerase sigma-70 like domain RNA_pol_sigma-70_dom Domain
IPR007627 RNA polymerase sigma-70 region 2 RNA_pol_sigma70_r2 Domain
IPR000943 RNA polymerase sigma-70 RNA_pol_sigma70 Domain
IPR012759 RNA polymerase sigma factor RpoH, proteobacteria RNA_pol_sigma_RpoH_proteobac Family
IPR007630 RNA polymerase sigma-70 region 4 RNA_pol_sigma70_r4 Domain
IPR007127 RNA polymerase sigma factor 70, region 1.1 RNA_pol_sigma_70_r1_1 Domain
IPR009042 RNA polymerase sigma-70 region 1.2 RNA_pol_sigma70_r1_2 Domain
IPR007624 RNA polymerase sigma-70 region 3 RNA_pol_sigma70_r3 Domain
IPR014218 RNA polymerase sigma-H type RNA_pol_sigma-H Family
IPR014200 RNA polymerase sigma-E type RNA_pol_sigma-E Family
IPR014209 RNA polymerase sigma-K type RNA_pol_sigma-K Family
IPR028617 RNA polymerase sigma factor FliA Sigma70_FliA Family
IPR012845 RNA polymerase sigma factor, FliA/WhiG RNA_pol_sigma_FliA_WhiG Family
IPR014305 RNA polymerase sigma-G type, actinobacteria RNA_pol_sigma-G_actinobac Family
IPR014327 RNA polymerase sigma-70, Bacteroidetes type RNA_pol_sigma70_bacteroid Family
IPR014325 RNA polymerase sigma-E type, actinobacteria RNA_pol_sigma-E_actinobac Family
IPR014326 RNA polymerase sigma-70 factor, Planctomycetaceae RNA_pol_sigma-70_Plancto Family
IPR014322 RNA polymerase sigma-B/F/G type RNA_pol_sigma-B/F/G Family
IPR014212 RNA polymerase sigma-G type RNA_pol_sigma-G Family
IPR014236 RNA polymerase sigma-F type RNA_pol_sigma-F Family
IPR014288 RNA polymerase sigma-B factor RNA_pol_sigma-B Family
IPR014331 RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica RNA_pol_sigma70_ECF_RHOBA Family
IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RNA_pol_sigma70_ECF_CS Conserved_site
IPR014303 RNA polymerase sigma-70, ECF type RNA_pol_sigma-70_ECF Family
IPR014300 RNA polymerase sigma-V type RNA_pol_sigma-V Family
IPR014244 RNA polymerase sigma-I type RNA_pol_sigma-I Family
IPR014289 RNA polymerase sigma-24-related RNA_pol_sigma-24-rel Family

To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)