Publication : Structure and function of bacterial sigma factors.

First Author  Helmann JD Year  1988
Journal  Annu Rev Biochem Volume  57
Pages  839-72 PubMed ID  3052291

73 Bio Entities

Id Name Short Name Type
IPR011262 DNA-directed RNA polymerase, insert domain DNA-dir_RNA_pol_insert Domain
IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 DNA-dir_RNA_pol_su2_6 Domain
IPR015712 DNA-directed RNA polymerase, subunit 2 DNA-dir_RNA_pol_su2 Family
IPR002092 DNA-directed RNA polymerase, phage-type DNA-dir_Rpol_phage-type Family
IPR006111 Archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit RpoK/Rpb6 Family
IPR001529 DNA-directed RNA polymerase, M/15kDa subunit DNA-dir_RNA_pol_M/15kDasu Domain
IPR013324 RNA polymerase sigma factor, region 3/4 RNA_pol_sigma_r3_r4 Domain
IPR015700 DNA-directed RNA polymerase III subunit RPC1 RPC1 Family
IPR006591 RNA polymerase archaeal subunit P/eukaryotic subunit RPABC4 RNAP_P/RPABC4 Family
IPR020708 DNA-directed RNA polymerase, 14-18kDa subunit, conserved site DNA-dir_RNA_polK_14-18kDa_CS Conserved_site
IPR019761 DNA-directed RNA polymerase M, 15kDa subunit, conserved site DNA-dir_RNA_pol-M_15_CS Conserved_site
IPR008193 DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site RNA_pol_Rpb11_13-16kDa_CS Conserved_site
IPR006590 RNA polymerase II, Rpb4, core RNA_pol_II_Rpb4_core Domain
IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RNA_pol_sigma70_r4_t2 Domain
IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain DNA-dir_RNA_pol_bsu_external_1 Domain
IPR013197 RNA polymerase III subunit RPC82-related, helix-turn-helix RNA_pol_III_RPC82-rel_HTH Domain
IPR008806 RNA polymerase III Rpc82, C -terminal RNA_pol_III_Rpc82_C Domain
IPR007631 RNA polymerase sigma factor 70, non-essential domain RNA_pol_sigma_70_non-ess Domain
IPR013325 RNA polymerase sigma factor, region 2 RNA_pol_sigma_r2 Domain
IPR014284 RNA polymerase sigma-70 like domain RNA_pol_sigma-70_dom Domain
IPR007627 RNA polymerase sigma-70 region 2 RNA_pol_sigma70_r2 Domain
IPR000394 RNA polymerase sigma factor 54 RNA_pol_sigma_54 Family
IPR000943 RNA polymerase sigma-70 RNA_pol_sigma70 Domain
IPR012759 RNA polymerase sigma factor RpoH, proteobacteria RNA_pol_sigma_RpoH_proteobac Family
IPR007630 RNA polymerase sigma-70 region 4 RNA_pol_sigma70_r4 Domain
IPR007127 RNA polymerase sigma factor 70, region 1.1 RNA_pol_sigma_70_r1_1 Domain
IPR024661 DNA-directed RNA polymerase III, subunit Rpc31 RNA_pol_III_Rpc31 Family
IPR009042 RNA polymerase sigma-70 region 1.2 RNA_pol_sigma70_r1_2 Domain
IPR007624 RNA polymerase sigma-70 region 3 RNA_pol_sigma70_r3 Domain
IPR012754 DNA-directed RNA polymerase, subunit beta-prime DNA-dir_RpoC_beta_prime Family

To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)