Contig : dd_Smed_v6_894_0_1 S. mediterranea

Id  dd_Smed_v6_894_0_1 Length  876    Open in Genome Browser

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Genes

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SequenceFeatures

3 Blast SequenceFeatures

Blast Target Species Blast Description evalue Contig Location Length Strand
NP_523792.2 Drosophila melanogaster FK506-binding protein 2 6.0E-43 111-425 315 1
NP_004107.1 Homo sapiens FK506 binding protein 1B, 12.6 kDa 1.0E-40 111-434 324 1
XP_003741384.1 Metaseiulus occidentalis 12 kDa FK506-binding protein-like 1.0E-49 111-434 324 1

5 Domain SequenceFeatures

Domain Type InterPro Domain Description Score Contig Location Length Strand
G3DSA:3.10.50.40 GENE3D   3.1E-49 114-431 318 1
PTHR10516 PANTHER IPR023566 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1.7E-60 111-431 321 1
SSF54534 SSF FKBP-like 1.73E-42 114-431 318 1
PS50059 PROFILE IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32.527 168-431 264 1
PF00254 PFAM IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase 1.9E-34 159-422 264 1

1 ORFs

Contig Location Length Strand Sequence
111-434 324 1

0 Treefam SequenceFeatures

 

Other

0 Publications




To cite PlanMine, please refer to the following publication:

Brandl, H., Moon, H., Vila-Farré, M., Liu, S.-Y., Henry, I., & Rink, J. C.
PlanMine - a mineable resource of planarian biology and biodiversity.
Nucleic Acids Research, gkv1148. doi:10.1093/nar/gkv1148 (2015)