Contig : dd_Smed_v6_8051_0_1 S. mediterranea

Id  dd_Smed_v6_8051_0_1 Length  1311    Open in Genome Browser

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Homologue Displayer

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Genes

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SequenceFeatures

3 Blast SequenceFeatures

Blast Target Species Blast Description evalue Contig Location Length Strand
XP_005091029.1 Aplysia californica protein TBATA-like 1.0E-18 177-833 657 1
XP_002121615.1 Ciona intestinalis protein TBATA-like 6.0E-16 174-824 651 1
XP_789620.2 Strongylocentrotus purpuratus protein SPATIAL-like 4.0E-14 174-833 660 1

2 Domain SequenceFeatures

Domain Type InterPro Domain Description Score Contig Location Length Strand
PF15256 PFAM SPATIAL 1.8E-11 174-470 297 1
PF15256 PFAM SPATIAL 1.0E-8 690-821 132 1

5 ORFs

Contig Location Length Strand Sequence
3-1193 1191 1
66-242 177 -1
224-397 174 -1
1025-1168 144 -1
205-318 114 -1

0 Treefam SequenceFeatures

 

Other

0 Publications




To cite PlanMine, please refer to the following publication:

Brandl, H., Moon, H., Vila-Farré, M., Liu, S.-Y., Henry, I., & Rink, J. C.
PlanMine - a mineable resource of planarian biology and biodiversity.
Nucleic Acids Research, gkv1148. doi:10.1093/nar/gkv1148 (2015)