Transcript : dd_Smed_v6_7_0_1 S. mediterranea

Length  4123     Open in Genome Browser Source  Transcriptome assembly (Trinity v2.2.0)
Published Transcripts 
EST: AY068618.1, clone H.73.5c unknown mRNA sequence
 Feedback

Organism Field Displayer

Association Displayer

Sequence Features

GO Displayer

3 Blast Sequence Features

Blast Target Species Blast Description evalue Contig Location Length Strand
XP_003614387.1 Medicago truncatula RRNA intron-encoded homing endonuclease 8.0E-34 1603-1866 264 1
NP_001091866.1 Danio rerio zgc:158463 9.0E-32 2052-2420 369 1
XP_004509500.1 Cicer arietinum uncharacterized LOC101508810 1.0E-45 1922-2362 441 1

0 Domain Sequence Features

Genomics

Predicted Gene Displayer

J Browse Displayer

Homologue Displayer

13 ORFs

Contig Location Length Strand Sequence
3712-3996 285 -1
3855-4121 267 1
768-932 165 1
1532-1687 156 1
128-280 153 1
1051-1182 132 -1
1396-1524 129 1
2749-2865 117 -1
2894-3007 114 1
1448-1558 111 -1
93-203 111 -1
479-583 105 1
599-703 105 -1

0 Treefam Sequence Features

Expression Information

Planmine Rnai Result Displayer

Planmine Anatomy Displayer

Planmine Cell Type Displayer

Planmine Single Cell Displayer

Planmine Timeseries Result Displayer

Planmine Regeneration Time Course Displayer

Planmine Additional Displayer




To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)