Contig : dd_Smed_v6_599_0_1 S. mediterranea

Id  dd_Smed_v6_599_0_1 Length  675    Open in Genome Browser

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Genes

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SequenceFeatures

3 Blast SequenceFeatures

Blast Target Species Blast Description evalue Contig Location Length Strand
NP_004093.1 Homo sapiens fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) 3.0E-30 111-524 414 1
XP_004406451.1 Odobenus rosmarus divergens fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) 1.0E-32 111-524 414 1
NP_001269194.1 Ictidomys tridecemlineatus fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) 1.0E-32 111-524 414 1

7 Domain SequenceFeatures

Domain Type InterPro Domain Description Score Contig Location Length Strand
PR00178 PRINTS IPR000463 Fatty acid-binding protein signature 5.01E-11 297-344 48 1
PR00178 PRINTS IPR000463 Fatty acid-binding protein signature 5.01E-11 120-185 66 1
G3DSA:2.40.128.20 GENE3D IPR012674   2.2E-42 111-524 414 1
SSF50814 SSF IPR011038 Lipocalins 1.36E-36 114-524 411 1
PF00061 PFAM IPR000566 Lipocalin / cytosolic fatty-acid binding protein family 2.2E-17 126-521 396 1
PS00214 PROSITE IPR000463 Cytosolic fatty-acid binding proteins signature. 0.0 126-176 51 1
PTHR11955 PANTHER FATTY ACID BINDING PROTEIN 9.7E-45 111-527 417 1

1 ORFs

Contig Location Length Strand Sequence
99-536 438 1

0 Treefam SequenceFeatures

 

Other

0 Publications




To cite PlanMine, please refer to the following publication:

Brandl, H., Moon, H., Vila-Farré, M., Liu, S.-Y., Henry, I., & Rink, J. C.
PlanMine - a mineable resource of planarian biology and biodiversity.
Nucleic Acids Research, gkv1148. doi:10.1093/nar/gkv1148 (2015)