Contig : dd_Smed_v6_510_0_1 S. mediterranea

Id  dd_Smed_v6_510_0_1 Length  1568    Open in Genome Browser

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Genes

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SequenceFeatures

3 Blast SequenceFeatures

Blast Target Species Blast Description evalue Contig Location Length Strand
NP_001419.1 Homo sapiens enolase 1, (alpha) 0.0 95-1390 1296 1
NP_001020559.1 Mus musculus enolase 1B, retrotransposed 0.0 95-1390 1296 1
NP_495900.1 Caenorhabditis elegans Protein ENOL-1 0.0 95-1390 1296 1

15 Domain SequenceFeatures

Domain Type InterPro Domain Description Score Contig Location Length Strand
G3DSA:3.20.20.120 GENE3D IPR029065 Enolase superfamily 1.2E-156 476-1384 909 1
PTHR11902 PANTHER IPR000941 ENOLASE 0.0 74-1387 1314 1
PF03952 PFAM IPR020811 Enolase, N-terminal domain 1.9E-56 101-493 393 1
G3DSA:3.30.390.10 GENE3D IPR029017 Enolase-like, N-terminal domain 8.0E-60 98-472 375 1
PR00148 PRINTS IPR000941 Enolase signature 2.08E-51 1115-1156 42 1
SSF54826 SSF IPR029017 Enolase N-terminal domain-like 9.06E-56 101-505 405 1
SSF51604 SSF IPR029065 Enolase C-terminal domain-like 7.64E-130 518-1381 864 1
PS00164 PROSITE IPR020809 Enolase signature. 0.0 1115-1153 39 1
PF00113 PFAM IPR020810 Enolase, C-terminal TIM barrel domain 9.8E-160 521-1384 864 1
PR00148 PRINTS IPR000941 Enolase signature 2.08E-51 413-460 48 1
PR00148 PRINTS IPR000941 Enolase signature 2.08E-51 1202-1252 51 1
PR00148 PRINTS IPR000941 Enolase signature 2.08E-51 1046-1078 33 1
PR00148 PRINTS IPR000941 Enolase signature 2.08E-51 197-238 42 1
PR00148 PRINTS IPR000941 Enolase signature 2.08E-51 584-622 39 1
TIGR01060 TIGRFAMs IPR000941 eno: phosphopyruvate hydratase 7.7E-169 101-1378 1278 1

6 ORFs

Contig Location Length Strand Sequence
95-1390 1296 1
530-667 138 -1
1262-1384 123 -1
828-944 117 1
773-889 117 -1
879-983 105 -1

2 Treefam SequenceFeatures

Gene Family Score Reading Frame Bit Score Coverage Contig Location Length Strand
TF300391 0.0 2 1024.4 0.8195153 108-1392 1285 1
TF354238 4.1E-63 2 212.6 0.60714287 414-1365 952 1
 

Other

0 Publications




To cite PlanMine, please refer to the following publication:

Brandl, H., Moon, H., Vila-Farré, M., Liu, S.-Y., Henry, I., & Rink, J. C.
PlanMine - a mineable resource of planarian biology and biodiversity.
Nucleic Acids Research, gkv1148. doi:10.1093/nar/gkv1148 (2015)