Contig : dd_Smed_v6_4_1_1 S. mediterranea

Id  dd_Smed_v6_4_1_1 Length  3719    Open in Genome Browser

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Planmine Rnai Result Displayer

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Planmine Regeneration Time Course Displayer

Homologue Displayer

Organism Field Displayer

Genes

GO Displayer

SequenceFeatures

3 Blast SequenceFeatures

Blast Target Species Blast Description evalue Contig Location Length Strand
XP_001900327.1 Brugia malayi Senescence-associated protein 4.0E-45 3103-3285 183 -1
XP_665229.1 Cryptosporidium hominis TU502 senescence-associated protein 4.0E-36 2873-3070 198 -1
XP_002139698.1 Cryptosporidium muris RN66 senescence-associated protein 2.0E-35 2849-3070 222 -1

0 Domain SequenceFeatures

15 ORFs

Contig Location Length Strand Sequence
867-1109 243 -1
433-657 225 1
1370-1585 216 1
194-394 201 1
3449-3640 192 1
1192-1371 180 -1
131-304 174 -1
938-1078 141 -1
2936-3067 132 1
1835-1963 129 -1
1185-1307 123 1
3079-3192 114 -1
1229-1342 114 -1
2570-2677 108 1
2631-2735 105 -1

0 Treefam SequenceFeatures

 

Other

0 Publications




To cite PlanMine, please refer to the following publication:

Brandl, H., Moon, H., Vila-Farré, M., Liu, S.-Y., Henry, I., & Rink, J. C.
PlanMine - a mineable resource of planarian biology and biodiversity.
Nucleic Acids Research, gkv1148. doi:10.1093/nar/gkv1148 (2015)