Contig : dd_Smed_v6_4622_0_1 S. mediterranea

Id  dd_Smed_v6_4622_0_1 Length  1214    Open in Genome Browser

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Genes

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SequenceFeatures

3 Blast SequenceFeatures

Blast Target Species Blast Description evalue Contig Location Length Strand
NP_006579.2 Homo sapiens sulfotransferase family, cytosolic, 1C, member 4 2.0E-42 343-1152 810 1
XP_005686709.1 Capra hircus sulfotransferase family, cytosolic, 1C, member 4 4.0E-48 313-1152 840 1
XP_007537401.1 Erinaceus europaeus sulfotransferase family, cytosolic, 1C, member 4 1.0E-47 343-1152 810 1

4 Domain SequenceFeatures

Domain Type InterPro Domain Description Score Contig Location Length Strand
PTHR11783 PANTHER SULFOTRANSFERASE (SULT) 1.1E-98 271-1155 885 1
SSF52540 SSF IPR027417 P-loop containing nucleoside triphosphate hydrolases 2.24E-72 310-1140 831 1
PF00685 PFAM IPR000863 Sulfotransferase domain 3.7E-57 385-1131 747 1
G3DSA:3.40.50.300 GENE3D IPR027417 P-loop containing nucleotide triphosphate hydrolases 2.7E-80 301-1140 840 1

5 ORFs

Contig Location Length Strand Sequence
271-1158 888 1
635-838 204 -1
873-1055 183 -1
302-442 141 1
343-477 135 -1

0 Treefam SequenceFeatures

 

Other

0 Publications




To cite PlanMine, please refer to the following publication:

Brandl, H., Moon, H., Vila-Farré, M., Liu, S.-Y., Henry, I., & Rink, J. C.
PlanMine - a mineable resource of planarian biology and biodiversity.
Nucleic Acids Research, gkv1148. doi:10.1093/nar/gkv1148 (2015)