Contig : dd_Smed_v6_4477_0_1 S. mediterranea

Id  dd_Smed_v6_4477_0_1 Length  888    Open in Genome Browser

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Homologue Displayer

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Genes

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SequenceFeatures

3 Blast SequenceFeatures

Blast Target Species Blast Description evalue Contig Location Length Strand
XP_002405527.1 Ixodes scapularis receptor-transporting protein, putative 4.0E-17 160-573 414 1
XP_006022507.1 Alligator sinensis receptor (chemosensory) transporter protein 1 4.0E-9 139-531 393 1
XP_007531510.1 Erinaceus europaeus receptor (chemosensory) transporter protein 3 2.0E-7 244-651 408 1

3 Domain SequenceFeatures

Domain Type InterPro Domain Description Score Contig Location Length Strand
PF13695 PFAM IPR027377 Zinc-binding domain 3.5E-13 256-549 294 1
PTHR14402 PANTHER IPR026096 RECEPTOR TRANSPORTING PROTEIN 3.3E-23 247-573 327 1
PTHR14402:SF11 PANTHER SUBFAMILY NOT NAMED 3.3E-23 247-573 327 1

5 ORFs

Contig Location Length Strand Sequence
28-744 717 1
168-464 297 -1
2-202 201 1
329-466 138 1
384-494 111 1

0 Treefam SequenceFeatures

 

Other

0 Publications




To cite PlanMine, please refer to the following publication:

Brandl, H., Moon, H., Vila-Farré, M., Liu, S.-Y., Henry, I., & Rink, J. C.
PlanMine - a mineable resource of planarian biology and biodiversity.
Nucleic Acids Research, gkv1148. doi:10.1093/nar/gkv1148 (2015)