Contig : dd_Smed_v6_42610_0_1 S. mediterranea

Id  dd_Smed_v6_42610_0_1 Length  1168    Open in Genome Browser

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Genes

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SequenceFeatures

0 Blast SequenceFeatures

14 Domain SequenceFeatures

Domain Type InterPro Domain Description Score Contig Location Length Strand
SSF49742 SSF IPR008977 PHM/PNGase F 1.46E-43 396-854 459 1
PTHR10157 PANTHER IPR000945 DOPAMINE BETA HYDROXYLASE RELATED 1.4E-165 3-1094 1092 1
G3DSA:2.60.120.310 GENE3D IPR000323   1.2E-43 3-407 405 1
PR00767 PRINTS IPR000945 Dopamine-beta-monooxygenase signature 2.34E-28 9-68 60 1
PR00767 PRINTS IPR000945 Dopamine-beta-monooxygenase signature 2.34E-28 942-1001 60 1
PR00767 PRINTS IPR000945 Dopamine-beta-monooxygenase signature 2.34E-28 408-458 51 1
PR00767 PRINTS IPR000945 Dopamine-beta-monooxygenase signature 2.34E-28 159-212 54 1
PR00767 PRINTS IPR000945 Dopamine-beta-monooxygenase signature 2.34E-28 216-272 57 1
PF01082 PFAM IPR000323 Copper type II ascorbate-dependent monooxygenase, N-terminal domain 1.6E-36 3-347 345 1
SSF49742 SSF IPR008977 PHM/PNGase F 1.57E-37 3-395 393 1
G3DSA:2.60.120.230 GENE3D IPR014784   1.1E-49 420-863 444 1
PS00084 PROSITE IPR020611 Copper type II, ascorbate-dependent monooxygenases signature 1. 0.0 105-125 21 1
PF03712 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain 2.1E-45 399-860 462 1
PTHR10157:SF4 PANTHER IPR028460 DOPAMINE BETA-HYDROXYLASE 1.4E-165 3-1094 1092 1

2 ORFs

Contig Location Length Strand Sequence
3-1115 1113 1
1033-1143 111 -1

1 Treefam SequenceFeatures

Gene Family Score Reading Frame Bit Score Coverage Contig Location Length Strand
TF320698 4.5E-162 3 541.2 0.86130136 3-1008 1006 1
 

Other

0 Publications




To cite PlanMine, please refer to the following publication:

Brandl, H., Moon, H., Vila-Farré, M., Liu, S.-Y., Henry, I., & Rink, J. C.
PlanMine - a mineable resource of planarian biology and biodiversity.
Nucleic Acids Research, gkv1148. doi:10.1093/nar/gkv1148 (2015)