Contig : dd_Smed_v6_3862_0_1 S. mediterranea

Id  dd_Smed_v6_3862_0_1 Length  1039    Open in Genome Browser

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Genes

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SequenceFeatures

3 Blast SequenceFeatures

Blast Target Species Blast Description evalue Contig Location Length Strand
NP_620471.3 Drosophila melanogaster CG1168 gene product from transcript CG1168-RB 3.0E-9 428-832 405 1
XP_008190030.1 Acyrthosiphon pisum neuroendocrine protein 7B2 2.0E-12 428-826 399 1
XP_004926576.1 Bombyx mori neuroendocrine protein 7B2-like 1.0E-11 458-826 369 1

3 Domain SequenceFeatures

Domain Type InterPro Domain Description Score Contig Location Length Strand
PTHR12738:SF0 PANTHER NEUROENDOCRINE PROTEIN 7B2 5.9E-22 155-850 696 1
PF05281 PFAM IPR007945 Neuroendocrine protein 7B2 precursor (Secretogranin V) 2.8E-24 365-742 378 1
PTHR12738 PANTHER IPR007945 NEUROENDOCRINE PROTEIN 7B2 5.9E-22 155-850 696 1

6 ORFs

Contig Location Length Strand Sequence
158-853 696 1
767-1039 273 -1
435-680 246 1
37-189 153 1
291-407 117 1
924-1037 114 -1

0 Treefam SequenceFeatures

 

Other

0 Publications




To cite PlanMine, please refer to the following publication:

Brandl, H., Moon, H., Vila-Farré, M., Liu, S.-Y., Henry, I., & Rink, J. C.
PlanMine - a mineable resource of planarian biology and biodiversity.
Nucleic Acids Research, gkv1148. doi:10.1093/nar/gkv1148 (2015)