Contig : dd_Smed_v6_26079_0_1 S. mediterranea

Id  dd_Smed_v6_26079_0_1 Length  452    Open in Genome Browser

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Homologue Displayer

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Genes

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SequenceFeatures

3 Blast SequenceFeatures

Blast Target Species Blast Description evalue Contig Location Length Strand
NP_728295.1 Drosophila melanogaster Cytochrome c oxidase subunit VIb 2.0E-18 126-341 216 1
XP_003743469.1 Metaseiulus occidentalis cytochrome c oxidase subunit 6B2-like 8.0E-20 132-332 201 1
XP_001653503.1 Aedes aegypti cytochrome c oxidase,-subunit VIb, putative 2.0E-19 126-341 216 1

4 Domain SequenceFeatures

Domain Type InterPro Domain Description Score Contig Location Length Strand
PTHR11387 PANTHER CYTOCHROME C OXIDASE POLYPEPTIDE VIB 2.8E-24 135-332 198 1
SSF47694 SSF IPR003213 Cytochrome c oxidase subunit h 1.24E-24 126-335 210 1
G3DSA:1.10.10.140 GENE3D IPR003213 Cytochrome C oxidase subunit h 1.2E-23 126-335 210 1
PF02297 PFAM IPR003213 Cytochrome oxidase c subunit VIb 6.8E-13 153-311 159 1

1 ORFs

Contig Location Length Strand Sequence
3-344 342 1

1 Treefam SequenceFeatures

Gene Family Score Reading Frame Bit Score Coverage Contig Location Length Strand
TF105065 4.2E-32 3 110.6 0.45353982 132-336 205 1
 

Other

0 Publications




To cite PlanMine, please refer to the following publication:

Brandl, H., Moon, H., Vila-Farré, M., Liu, S.-Y., Henry, I., & Rink, J. C.
PlanMine - a mineable resource of planarian biology and biodiversity.
Nucleic Acids Research, gkv1148. doi:10.1093/nar/gkv1148 (2015)