Contig : dd_Smed_v6_1702_0_1 S. mediterranea

Id  dd_Smed_v6_1702_0_1 Length  1052    Open in Genome Browser

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Homologue Displayer

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Genes

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SequenceFeatures

3 Blast SequenceFeatures

Blast Target Species Blast Description evalue Contig Location Length Strand
NP_732312.1 Drosophila melanogaster CG31196 gene product from transcript CG31196-RD 7.0E-105 145-846 702 1
NP_006752.1 Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 4.0E-101 145-846 702 1
XP_322009.2 Anopheles gambiae str. PEST AGAP001151-PA 1.0E-105 145-846 702 1

13 Domain SequenceFeatures

Domain Type InterPro Domain Description Score Contig Location Length Strand
PR00305 PRINTS IPR000308 14-3-3 protein zeta signature 3.3E-81 394-465 72 1
PR00305 PRINTS IPR000308 14-3-3 protein zeta signature 3.3E-81 250-336 87 1
PR00305 PRINTS IPR000308 14-3-3 protein zeta signature 3.3E-81 592-669 78 1
PR00305 PRINTS IPR000308 14-3-3 protein zeta signature 3.3E-81 754-840 87 1
PR00305 PRINTS IPR000308 14-3-3 protein zeta signature 3.3E-81 487-552 66 1
SM00101 SMART IPR023410 14-3-3 homologues 1.3E-151 154-873 720 1
PS00796 PROSITE IPR023409 14-3-3 proteins signature 1. 0.0 268-297 30 1
PF00244 PFAM IPR023410 14-3-3 protein 9.4E-110 154-852 699 1
G3DSA:1.20.190.20 GENE3D IPR023410   2.6E-111 145-834 690 1
PR00305 PRINTS IPR000308 14-3-3 protein zeta signature 3.3E-81 673-750 78 1
SSF48445 SSF IPR023410 14-3-3 protein 1.57E-99 145-840 696 1
PS00797 PROSITE IPR023409 14-3-3 proteins signature 2. 0.0 781-837 57 1
PTHR18860 PANTHER IPR000308 14-3-3 PROTEIN 4.2E-163 145-855 711 1

3 ORFs

Contig Location Length Strand Sequence
145-900 756 1
291-443 153 -1
698-838 141 -1

1 Treefam SequenceFeatures

Gene Family Score Reading Frame Bit Score Coverage Contig Location Length Strand
TF102002 5.0E-108 1 361.0 0.67110264 156-861 706 1
 

Other

0 Publications




To cite PlanMine, please refer to the following publication:

Brandl, H., Moon, H., Vila-Farré, M., Liu, S.-Y., Henry, I., & Rink, J. C.
PlanMine - a mineable resource of planarian biology and biodiversity.
Nucleic Acids Research, gkv1148. doi:10.1093/nar/gkv1148 (2015)