Transcript : dd_Smed_v6_15647_0_1 S. mediterranea

Length  1063     Open in Genome Browser Source  Transcriptome assembly (Trinity v2.2.0)
 Feedback

Organism Field Displayer

Association Displayer

Sequence Features

GO Displayer

3 Blast Sequence Features

Blast Target Species Blast Description evalue Contig Location Length Strand
NP_061221.2 Mus musculus sulfotransferase family, cytosolic, 1C, member 1 1.0E-45 224-1057 834 1
NP_001008743.1 Homo sapiens sulfotransferase family, cytosolic, 1C, member 3 2.0E-45 233-1057 825 1
XP_002811788.1 Pongo abelii sulfotransferase 1C3-like 2.0E-49 254-1039 786 1

4 Domain Sequence Features

Domain Type InterPro Domain Description Score Contig Location Length Strand
PF00685 PFAM IPR000863 Sulfotransferase domain 5.8E-56 287-1015 729 1
SSF52540 SSF IPR027417 P-loop containing nucleoside triphosphate hydrolases 1.64E-66 209-1042 834 1
G3DSA:3.40.50.300 GENE3D IPR027417 P-loop containing nucleotide triphosphate hydrolases 2.9E-78 209-1045 837 1
PTHR11783 PANTHER SULFOTRANSFERASE (SULT) 2.1E-88 179-1054 876 1

Genomics

Predicted Gene Displayer

J Browse Displayer

Homologue Displayer

1 ORFs

Contig Location Length Strand Sequence
188-1057 870 1

0 Treefam Sequence Features

Expression Information

Planmine Rnai Result Displayer

Planmine Anatomy Displayer

Planmine Cell Type Displayer

Planmine Single Cell Displayer

Planmine Timeseries Result Displayer

Planmine Regeneration Time Course Displayer

Planmine Additional Displayer




To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)