Transcript : dd_Smed_v6_14495_0_1 S. mediterranea

Length  684     Open in Genome Browser Source  Transcriptome assembly (Trinity v2.2.0)

Organism Field Displayer

Association Displayer

Sequence Features

GO Displayer

3 Blast Sequence Features

Blast Target Species Blast Description evalue Contig Location Length Strand
XP_002088456.1 Drosophila yakuba GE12380 gene product from transcript GE12380-RA 4.0E-18 5-523 519 1
XP_003373752.1 Trichinella spiralis reverse transcriptase (RNA-dependent DNA polymerase) subfamily 8.0E-13 8-541 534 1
XP_002411104.1 Ixodes scapularis reverse transcriptase, putative 1.0E-6 23-523 501 1

0 Domain Sequence Features


Predicted Gene Displayer

J Browse Displayer

Homologue Displayer

6 ORFs

Contig Location Length Strand Sequence
2-547 546 1
1-234 234 -1
261-434 174 1
528-683 156 -1
3-113 111 1
352-453 102 -1

1 Treefam Sequence Features

Gene Family Score Reading Frame Bit Score Coverage Contig Location Length Strand
TF351906 3.8E-5 2 19.8 0.4005848 177-450 274 1

Expression Information

Planmine Rnai Result Displayer

Planmine Anatomy Displayer

Planmine Cell Type Displayer

Planmine Single Cell Displayer

Planmine Timeseries Result Displayer

Planmine Regeneration Time Course Displayer

Planmine Additional Displayer

To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)