J Browse Displayer
Planmine Rnai Result Displayer
Planmine Anatomy Displayer
Planmine Cell Type Displayer
Planmine Timeseries Result Displayer
Planmine Regeneration Time Course Displayer
Homologue Displayer
Organism Field Displayer
SequenceFeatures
3 Blast SequenceFeatures
| Blast | Target Species | Blast Description | evalue | Contig Location | Length | Strand |
|---|---|---|---|---|---|---|
| NP_001138160.2 | Drosophila melanogaster | CG42265 gene product from transcript CG42265-RE | 1.0E-64 | 760-1998 | 1239 | 1 |
| XP_001658062.1 | Aedes aegypti | otopetrin | 2.0E-68 | 271-1998 | 1728 | 1 |
| XP_002009968.1 | Drosophila mojavensis | GI15657 gene product from transcript GI15657-RA | 1.0E-67 | 760-1998 | 1239 | 1 |
4 Domain SequenceFeatures
| Domain | Type | InterPro | Domain Description | Score | Contig Location | Length | Strand |
|---|---|---|---|---|---|---|---|
| PTHR21522:SF32 | PANTHER | PROTEIN OTPL-3 | 2.4E-111 | 256-1995 | 1740 | 1 | |
| PF03189 | PFAM | IPR004878 | Otopetrin | 7.4E-59 | 1150-1950 | 801 | 1 |
| PTHR21522 | PANTHER | IPR004878 | OTOPETRIN | 2.4E-111 | 256-1995 | 1740 | 1 |
| PF03189 | PFAM | IPR004878 | Otopetrin | 1.1E-18 | 784-1140 | 357 | 1 |
6 ORFs
| Contig Location | Length | Strand | Sequence |
|---|---|---|---|
| 163-2019 | 1857 | 1 | |
| 1443-1631 | 189 | -1 | |
| 464-598 | 135 | -1 | |
| 203-325 | 123 | 1 | |
| 456-575 | 120 | -1 | |
| 1064-1177 | 114 | -1 |
1 Treefam SequenceFeatures
| Gene Family | Score | Reading Frame | Bit Score | Coverage | Contig Location | Length | Strand |
|---|---|---|---|---|---|---|---|
| TF313428 | 1.8E-113 | 1 | 380.3 | 0.8164344 | 291-1989 | 1699 | 1 |
