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Gene Predictions

Gene Predictions Data Source
Gene Predictions Data source
SMESG-all
[release 1]

All Augustus predictions (unfiltered raw data)

No. of transcripts: 132,355
No. of genes: 82,007

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SMESG-repeat filtered
[release 1]

Full set filtered for repeats (for exact criteria see User Guide)

No. of transcripts: 48,281
No. of genes: 30,917

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SMESG-high confidence
[release 1]

Repeat filtered and coverage filtered (for exact criteria see User Guide)

No. of transcripts: 31,102
No. of genes: 22,192

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To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)